Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.71□□□□□ -0.21
Trav12-3A0A075B648 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12-3A0A075B648 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Trav12-3A0A075B648 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav12-3A0A075B648 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav12-3A0A075B648 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav12-3A0A075B648 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav12-3A0A075B648 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Mir6236-201ENSMUST00000184437 123 ntBASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav12-3A0A075B648 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-3A0A075B648 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-3A0A075B648 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-3A0A075B648 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-3A0A075B648 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav12-3A0A075B648 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav12-3A0A075B648 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms