Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Trav7-6A0A075B640 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7-6A0A075B640 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav7-6A0A075B640 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7-6A0A075B640 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trav7-6A0A075B640 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7-6A0A075B640 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.09□□□□□ -0.31
Trav7-6A0A075B640 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms