Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4d-3A0A075B625 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4d-3A0A075B625 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.77□□□□□ -0.36
Trav4d-3A0A075B625 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4d-3A0A075B625 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4d-3A0A075B625 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4d-3A0A075B625 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Trav4d-3A0A075B625 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4d-3A0A075B625 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4d-3A0A075B625 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4d-3A0A075B625 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4d-3A0A075B625 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4d-3A0A075B625 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4d-3A0A075B625 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4d-3A0A075B625 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav4d-3A0A075B625 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav4d-3A0A075B625 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav4d-3A0A075B625 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4d-3A0A075B625 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4d-3A0A075B625 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4d-3A0A075B625 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4d-3A0A075B625 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4d-3A0A075B625 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav4d-3A0A075B625 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4d-3A0A075B625 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Trav4d-3A0A075B625 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms