Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Olfr1347-202ENSMUST00000207339 1737 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm2762-207ENSMUST00000202739 2665 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Tmod2-203ENSMUST00000164100 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 4930503E24Rik-201ENSMUST00000219167 1333 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm22811-201ENSMUST00000157468 154 ntBASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Ang-ps1-201ENSMUST00000162314 436 ntBASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm27651-201ENSMUST00000183465 246 ntBASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm5539-201ENSMUST00000192177 966 ntBASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm43218-201ENSMUST00000196275 344 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm44902-201ENSMUST00000206177 805 ntBASIC9.55□□□□□ -0.88
Nup88Q8CEC0 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 AC133189.3-201ENSMUST00000226269 878 ntBASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Snora74a-201ENSMUST00000083715 196 ntBASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Eif4enif1-201ENSMUST00000020734 3565 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 CT571245.1-201ENSMUST00000218642 3465 ntBASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 4930425K24Rik-201ENSMUST00000222054 2143 ntBASIC9.55□□□□□ -0.88
Nup88Q8CEC0 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup88Q8CEC0 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Cnot2-209ENSMUST00000167706 1621 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm13682-201ENSMUST00000117524 702 ntBASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm8644-201ENSMUST00000118619 596 ntBASIC9.54□□□□□ -0.88
Nup88Q8CEC0 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Tle6-213ENSMUST00000151858 627 ntTSL 3 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm26184-201ENSMUST00000157686 131 ntBASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Phf11d-202ENSMUST00000160425 1281 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm43952-201ENSMUST00000203765 751 ntBASIC9.54□□□□□ -0.88
Nup88Q8CEC0 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm8995-202ENSMUST00000208417 3490 ntBASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm37956-201ENSMUST00000195208 2010 ntBASIC9.54□□□□□ -0.88
Nup88Q8CEC0 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 AC121942.3-201ENSMUST00000225768 1436 ntBASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Patj-207ENSMUST00000107034 4799 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 166.8 ms