Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm23132-201ENSMUST00000104254 132 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm11875-201ENSMUST00000118187 799 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm15363-201ENSMUST00000118897 631 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm12305-201ENSMUST00000151817 407 ntTSL 2 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Mir3091-201ENSMUST00000175086 76 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm6695-201ENSMUST00000177264 1172 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm3591-202ENSMUST00000179312 396 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm5710-201ENSMUST00000183020 995 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm20936-201ENSMUST00000191049 658 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm37282-201ENSMUST00000191987 164 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm37665-201ENSMUST00000192353 149 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm36996-201ENSMUST00000194466 250 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm43835-201ENSMUST00000195932 149 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm43535-201ENSMUST00000197846 164 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm40332-201ENSMUST00000199847 938 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm44379-201ENSMUST00000204501 164 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm44268-201ENSMUST00000204814 164 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm18857-201ENSMUST00000210421 901 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 AC115784.1-201ENSMUST00000227687 1010 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Mkl2-202ENSMUST00000056715 618 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm7936-201ENSMUST00000069529 375 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm10689-201ENSMUST00000098864 432 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Ift46-202ENSMUST00000118186 1317 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 4930503E24Rik-201ENSMUST00000219167 1333 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm8354-201ENSMUST00000189223 1373 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Grik1-210ENSMUST00000228034 2708 ntBASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Gm12887B1AVM1 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm2098-201ENSMUST00000189146 1763 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Uqcc2-202ENSMUST00000118613 426 ntTSL 3 BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm13252-201ENSMUST00000119355 321 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm25780-201ENSMUST00000122528 253 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 E130120K24Rik-201ENSMUST00000129910 556 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm16580-201ENSMUST00000162696 1044 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm26379-201ENSMUST00000178125 138 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm29145-201ENSMUST00000189914 456 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm17806-201ENSMUST00000195844 383 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm38941-201ENSMUST00000208606 529 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm3011-201ENSMUST00000215669 582 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 AC137117.2-201ENSMUST00000228560 282 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Gm12887B1AVM1 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Gm12887B1AVM1 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Gm12887B1AVM1 Gm44178-201ENSMUST00000205229 2930 ntBASIC6.4□□□□□ -1.39
Gm12887B1AVM1 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.4□□□□□ -1.39
Gm12887B1AVM1 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Gm12887B1AVM1 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms