Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm43679-201ENSMUST00000197051 3677 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm12258-201ENSMUST00000093768 2524 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 AC132384.7-201ENSMUST00000220198 1391 ntBASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Duxbl1-203ENSMUST00000172667 2209 ntTSL 5 BASIC9.58□□□□□ -0.88
Nup88Q8CEC0 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Dctn5-201ENSMUST00000033156 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Defa-ps4-201ENSMUST00000118021 183 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gm12034-201ENSMUST00000119032 399 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gm12170-201ENSMUST00000119281 300 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gm13666-201ENSMUST00000120032 799 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gm24004-201ENSMUST00000158460 178 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gm43805-201ENSMUST00000198488 824 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gm5173-201ENSMUST00000219616 950 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gm8153-201ENSMUST00000219844 952 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 CT009539.1-201ENSMUST00000226465 220 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Fgfbp1-201ENSMUST00000061299 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Mir30c-1-201ENSMUST00000083556 89 ntBASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Btg1-ps2-201ENSMUST00000089060 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nup88Q8CEC0 Gm43149-201ENSMUST00000198162 1422 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm10744-201ENSMUST00000220184 2706 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Strn-201ENSMUST00000024881 2967 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm23358-201ENSMUST00000103887 110 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm25762-201ENSMUST00000103984 132 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm12727-201ENSMUST00000119885 359 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm15928-201ENSMUST00000122455 280 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm17051-201ENSMUST00000170787 487 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm20319-201ENSMUST00000172522 771 ntTSL 2 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm9149-201ENSMUST00000182724 1007 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm3142-201ENSMUST00000190107 414 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm28266-201ENSMUST00000191410 439 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 AC132468.1-201ENSMUST00000224706 499 ntBASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Ghrh-201ENSMUST00000029172 516 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup88Q8CEC0 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms