Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Snap25-201ENSMUST00000028727 2116 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Spink4-201ENSMUST00000030122 397 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm8054-201ENSMUST00000093411 483 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Trim43b-201ENSMUST00000167113 2262 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm42759-201ENSMUST00000195915 2439 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Dennd6a-205ENSMUST00000224378 2424 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm37303-201ENSMUST00000194202 1559 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gsdmc3-202ENSMUST00000185526 2179 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 BC085271-201ENSMUST00000191852 1487 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 AC154862.1-201ENSMUST00000225060 1763 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm4849-201ENSMUST00000188428 2246 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 AC154461.2-201ENSMUST00000225462 1980 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Nt5c1b-211ENSMUST00000218339 1843 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Nt5c1b-201ENSMUST00000002456 1849 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Sncaip-210ENSMUST00000179689 1512 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 AC140209.1-203ENSMUST00000227412 1524 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm9742-202ENSMUST00000222219 1396 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Cast-201ENSMUST00000065629 2910 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Frk-202ENSMUST00000170771 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm14258-201ENSMUST00000144607 2031 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm10619-202ENSMUST00000186073 3287 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm9776-201ENSMUST00000059598 2980 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Tpd52l2-201ENSMUST00000000844 2950 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm42837-201ENSMUST00000197071 2829 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm2762-207ENSMUST00000202739 2665 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm12479-201ENSMUST00000120731 1585 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm45360-201ENSMUST00000210698 1405 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Sez6-201ENSMUST00000000646 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm14335-201ENSMUST00000119165 810 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm13543-201ENSMUST00000121230 796 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm22987-201ENSMUST00000122757 246 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 1700019N19Rik-202ENSMUST00000166692 983 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gstm5-204ENSMUST00000169365 810 ntTSL 2 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm3371-202ENSMUST00000177827 489 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm26968-201ENSMUST00000182894 481 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm29492-201ENSMUST00000187124 457 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm18445-201ENSMUST00000195502 774 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm5291-201ENSMUST00000201965 899 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm5339-201ENSMUST00000210551 1102 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm9655-201ENSMUST00000211321 1284 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm18160-201ENSMUST00000214279 827 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Stmn1-rs1-201ENSMUST00000214793 462 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 AC153508.1-201ENSMUST00000218849 967 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 AC124772.3-201ENSMUST00000222535 575 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 AC160991.2-201ENSMUST00000223784 1135 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 AV026068-224ENSMUST00000224827 928 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 AC154738.1-201ENSMUST00000227054 368 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 AC122821.1-201ENSMUST00000228934 705 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Copg1-201ENSMUST00000049966 921 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm5111-201ENSMUST00000064744 964 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Olfr1224-ps1-201ENSMUST00000099792 936 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Tdrd5-204ENSMUST00000167528 3210 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Katna1-202ENSMUST00000165806 1775 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Katna1-201ENSMUST00000019929 1774 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gm6545-201ENSMUST00000217186 1786 ntBASIC8.24□□□□□ -1.09
Trim39Q9ESN2 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim39Q9ESN2 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms