Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm5262-201ENSMUST00000180655 996 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 1700061E17Rik-201ENSMUST00000185439 1067 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm29513-201ENSMUST00000185741 202 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm20844-201ENSMUST00000186101 654 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm29371-201ENSMUST00000186823 885 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm20921-201ENSMUST00000188265 652 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm2707-201ENSMUST00000188979 714 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm37632-201ENSMUST00000191811 1142 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm29808-201ENSMUST00000194419 468 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm42511-201ENSMUST00000196160 234 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm43965-201ENSMUST00000203779 789 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 1190028D05Rik-201ENSMUST00000210977 763 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm45527-201ENSMUST00000211052 774 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 AC119987.1-201ENSMUST00000212316 848 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm18039-201ENSMUST00000217816 728 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm6859-201ENSMUST00000218614 989 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm19045-201ENSMUST00000222488 1193 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm18500-201ENSMUST00000223493 820 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Tmem202-201ENSMUST00000055345 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Olfr523-201ENSMUST00000055890 1056 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm25135-201ENSMUST00000082648 143 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Scgb2b26-201ENSMUST00000085623 579 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm10557-201ENSMUST00000097690 750 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Cox7a1-201ENSMUST00000098594 393 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Clasp1-221ENSMUST00000191823 3916 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm33023-202ENSMUST00000212450 1571 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Cd209c-201ENSMUST00000044060 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Golm1-202ENSMUST00000095739 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Nsg2-202ENSMUST00000093219 1974 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Eprn-201ENSMUST00000223470 1306 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Zfp946-202ENSMUST00000120222 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Nron-203ENSMUST00000156297 3340 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Zfp982-202ENSMUST00000105721 1488 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Nt5dc1-201ENSMUST00000047885 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Il12b-202ENSMUST00000170513 1944 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm45263-201ENSMUST00000210377 1375 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm37949-201ENSMUST00000192808 2091 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Scgb1b30-201ENSMUST00000108083 491 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm12431-201ENSMUST00000120693 168 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm3244-201ENSMUST00000120938 390 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Vmn1r221-201ENSMUST00000122275 1084 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm15077-201ENSMUST00000122344 362 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm11871-201ENSMUST00000122429 1061 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm13483-202ENSMUST00000138528 1160 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm12257-201ENSMUST00000148244 585 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm22669-201ENSMUST00000158723 318 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm16300-201ENSMUST00000160031 1279 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Tmem95-201ENSMUST00000178597 531 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Platr11-201ENSMUST00000182885 388 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm6644-201ENSMUST00000186507 951 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm29585-202ENSMUST00000187855 425 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm29184-201ENSMUST00000190038 334 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm3544-201ENSMUST00000196129 305 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm19843-201ENSMUST00000198144 772 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm44243-201ENSMUST00000204323 692 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Gm44138-201ENSMUST00000204939 271 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Cd209a-203ENSMUST00000207979 802 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 AC111046.1-201ENSMUST00000217715 412 ntBASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim39Q9ESN2 Xcl1-201ENSMUST00000027860 523 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms