Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm15533-202ENSMUST00000206216 3262 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Rab23-202ENSMUST00000115174 4218 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Ces2g-201ENSMUST00000043183 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Hbp1-202ENSMUST00000172314 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Igkv4-58-201ENSMUST00000103355 292 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 1700001P01Rik-201ENSMUST00000107576 624 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Wfdc11-201ENSMUST00000109332 617 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm12736-201ENSMUST00000119330 236 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm13670-201ENSMUST00000120947 461 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm12109-201ENSMUST00000121140 697 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 AU019990-203ENSMUST00000153028 888 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Atpaf1-202ENSMUST00000175725 996 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm26739-201ENSMUST00000181041 427 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm29323-201ENSMUST00000189792 332 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Alg14-204ENSMUST00000199554 441 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 AC121821.1-201ENSMUST00000199921 111 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Ociad1-207ENSMUST00000201556 999 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm39094-202ENSMUST00000206679 624 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm44706-201ENSMUST00000206822 815 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm45620-201ENSMUST00000209980 468 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Rpl19-ps2-201ENSMUST00000219540 590 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 AC192334.3-201ENSMUST00000221828 569 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm9158-201ENSMUST00000222116 582 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 AC154849.2-201ENSMUST00000223781 974 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 AC090654.1-201ENSMUST00000225584 1071 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 AC123665.2-201ENSMUST00000226636 432 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 AC131033.2-201ENSMUST00000228138 1011 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Mir341-201ENSMUST00000093593 96 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Pdik1l-202ENSMUST00000105876 4509 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Magea8-201ENSMUST00000070141 1646 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 CT572991.1-201ENSMUST00000222755 1423 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 CT571245.1-201ENSMUST00000218642 3465 ntBASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Zfp551-202ENSMUST00000120220 2195 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim39Q9ESN2 Tom1l1-203ENSMUST00000107868 2093 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Smok4a-202ENSMUST00000144015 2317 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm3126-201ENSMUST00000216513 1468 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm29055-201ENSMUST00000186337 1710 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Adh6b-202ENSMUST00000199673 1700 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Fam13a-202ENSMUST00000173193 1998 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Pex2-205ENSMUST00000191916 1376 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 AC115744.1-201ENSMUST00000222398 2379 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Eef1g-201ENSMUST00000052248 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 2610028H24Rik-201ENSMUST00000092406 1640 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Hadha-205ENSMUST00000156859 4017 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm45220-201ENSMUST00000207847 2509 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 AC187103.1-202ENSMUST00000223904 1536 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Ccdc159-201ENSMUST00000006403 1531 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Igkv4-86-201ENSMUST00000103337 340 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Ighv1-7-201ENSMUST00000103496 388 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm12825-201ENSMUST00000120249 563 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm12508-201ENSMUST00000121282 480 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm12706-201ENSMUST00000121588 698 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Hk1os-202ENSMUST00000142968 343 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm26487-201ENSMUST00000158022 94 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm24349-201ENSMUST00000158709 101 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Gm6467-201ENSMUST00000171547 609 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Mir3093-201ENSMUST00000175247 87 ntBASIC8.26□□□□□ -1.09
Trim39Q9ESN2 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms