Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm12421-201ENSMUST00000119071 307 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Olfr621-ps1-201ENSMUST00000119741 938 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm26407-201ENSMUST00000158504 307 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm20507-201ENSMUST00000163245 2860 ntTSL 2 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm23413-201ENSMUST00000175521 125 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm42698-201ENSMUST00000197790 762 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm43690-201ENSMUST00000201213 266 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Sycp3-201ENSMUST00000020252 1139 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 AC079245.1-201ENSMUST00000215680 1454 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 AC155269.1-201ENSMUST00000220843 769 ntTSL 5 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 CT009546.3-201ENSMUST00000220914 208 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 AC160340.1-201ENSMUST00000222952 3964 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 AC158983.1-201ENSMUST00000225691 221 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Oog4-201ENSMUST00000061277 1981 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm26003-201ENSMUST00000083061 113 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm36993-201ENSMUST00000192983 2980 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm38365-201ENSMUST00000195720 2993 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm21129-201ENSMUST00000185932 2560 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Gm29258-201ENSMUST00000186842 2564 ntBASIC9.69□□□□□ -0.86
Nup88Q8CEC0 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 AC161117.1-201ENSMUST00000221366 1529 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 AC122539.3-201ENSMUST00000218355 1431 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 AC122887.1-201ENSMUST00000219265 2722 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm11207-201ENSMUST00000117824 414 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm15753-201ENSMUST00000119241 1062 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm15571-201ENSMUST00000119887 637 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm12297-201ENSMUST00000121380 979 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm14156-201ENSMUST00000121538 483 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm24838-201ENSMUST00000158684 130 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm20918-201ENSMUST00000179629 684 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm29142-201ENSMUST00000188009 696 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm28508-201ENSMUST00000188016 696 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm6123-201ENSMUST00000193658 1069 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm7482-201ENSMUST00000206446 505 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm38405-201ENSMUST00000207760 1140 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm2649-201ENSMUST00000218825 610 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 AC125350.5-201ENSMUST00000226102 517 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 AC164879.1-201ENSMUST00000227904 1021 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Tssk4-206ENSMUST00000228041 1217 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 E030024N20Rik-201ENSMUST00000075293 494 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Olfr319-201ENSMUST00000076965 921 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm42907-201ENSMUST00000199793 2148 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Gm45873-201ENSMUST00000211865 1915 ntBASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup88Q8CEC0 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Fbxo3-203ENSMUST00000111135 3740 ntTSL 5 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Gm5442-201ENSMUST00000202121 2034 ntBASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC9.67□□□□□ -0.86
Nup88Q8CEC0 Crem-209ENSMUST00000129435 1160 ntTSL 5 BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms