Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm43430-201ENSMUST00000196513 3897 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 AC170188.1-201ENSMUST00000223710 1963 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 1700013D24Rik-201ENSMUST00000112537 535 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm6880-201ENSMUST00000114125 627 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm15504-201ENSMUST00000119674 265 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm11461-201ENSMUST00000119909 387 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm11999-201ENSMUST00000145789 813 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Rps10-208ENSMUST00000178774 498 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm7132-201ENSMUST00000182302 984 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm6931-202ENSMUST00000183137 1009 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm37787-201ENSMUST00000192524 585 ntTSL 5 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm42441-201ENSMUST00000199778 748 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm42495-201ENSMUST00000200324 405 ntTSL 3 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm43129-201ENSMUST00000201237 603 ntTSL 3 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm29725-201ENSMUST00000206614 407 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm45323-201ENSMUST00000209853 413 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 AC155929.2-201ENSMUST00000218541 307 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Mir185-201ENSMUST00000083530 65 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 D3Ertd751e-203ENSMUST00000108065 3452 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm38315-201ENSMUST00000194286 2437 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm11231-201ENSMUST00000117895 1706 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Gm8605-201ENSMUST00000221619 1370 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 CT010514.1-201ENSMUST00000214088 2969 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Srsf5-203ENSMUST00000110352 1491 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 AC159810.1-201ENSMUST00000214838 1480 ntBASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Nt5c1b-202ENSMUST00000118657 1792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Gm12887B1AVM1 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm38300-201ENSMUST00000194245 1870 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm43149-201ENSMUST00000198162 1422 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Olfr381-203ENSMUST00000214623 2656 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm25763-201ENSMUST00000104099 129 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Fam220-ps-201ENSMUST00000116535 783 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Mir1190-201ENSMUST00000116925 96 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm15516-201ENSMUST00000117292 193 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm11621-201ENSMUST00000118253 589 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm11340-201ENSMUST00000119226 412 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm12178-201ENSMUST00000120545 330 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm12455-201ENSMUST00000121242 416 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 4931406B18Rik-202ENSMUST00000163474 726 ntTSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm17147-201ENSMUST00000164176 432 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm11942-201ENSMUST00000180255 345 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm27406-201ENSMUST00000184881 182 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm5256-201ENSMUST00000191412 877 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm45166-201ENSMUST00000209073 683 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 AC124173.1-201ENSMUST00000223701 189 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 AC123692.1-201ENSMUST00000227514 730 ntBASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Gm12887B1AVM1 Gm13178-201ENSMUST00000036876 1227 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms