Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm27228-201ENSMUST00000184500 1038 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm5256-201ENSMUST00000191412 877 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm35067-201ENSMUST00000194355 647 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Anapc15-ps-202ENSMUST00000218771 399 ntAPPRIS P5 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm10451-202ENSMUST00000219367 855 ntTSL 2 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm6187-201ENSMUST00000040649 960 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Fxyd2-201ENSMUST00000041005 632 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 n-R5s28-201ENSMUST00000082814 119 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 CT025548.2-201ENSMUST00000226227 1329 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Clca2-201ENSMUST00000040465 3986 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm5182-201ENSMUST00000217708 6092 ntBASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup88Q8CEC0 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Serpina1c-201ENSMUST00000074051 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 AC156790.4-202ENSMUST00000228838 1418 ntBASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Kng1-203ENSMUST00000089902 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm11868-201ENSMUST00000121594 1478 ntBASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Arpc3-204ENSMUST00000111716 838 ntTSL 2 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm11258-201ENSMUST00000121086 1218 ntBASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm15742-201ENSMUST00000123905 659 ntTSL 3 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm23195-201ENSMUST00000158814 129 ntBASIC9.75□□□□□ -0.85
Nup88Q8CEC0 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm25690-201ENSMUST00000175439 77 ntBASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm25442-201ENSMUST00000177270 92 ntBASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm26726-201ENSMUST00000181889 395 ntTSL 3 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 2610037D02Rik-202ENSMUST00000185067 2997 ntBASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm20936-201ENSMUST00000191049 658 ntBASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm32220-201ENSMUST00000218420 298 ntBASIC9.75□□□□□ -0.85
Nup88Q8CEC0 AC154598.2-201ENSMUST00000227114 604 ntBASIC9.75□□□□□ -0.85
Nup88Q8CEC0 8030411F24Rik-201ENSMUST00000028933 602 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Olfr117-203ENSMUST00000215414 3498 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 AC160118.1-201ENSMUST00000214497 2457 ntBASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Nup88Q8CEC0 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 AC154227.2-201ENSMUST00000228677 2101 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm45832-201ENSMUST00000212762 1443 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm36938-201ENSMUST00000191612 2696 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Zscan22-202ENSMUST00000117189 2995 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 AC165260.6-204ENSMUST00000225571 3508 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Sat2-202ENSMUST00000108656 968 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm16541-201ENSMUST00000160992 614 ntTSL 3 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm6586-201ENSMUST00000167028 643 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm8857-201ENSMUST00000170064 1102 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm8870-201ENSMUST00000188170 775 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm8510-201ENSMUST00000189202 895 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm6236-201ENSMUST00000193785 1009 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm43394-201ENSMUST00000198671 694 ntBASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 Gm45323-201ENSMUST00000209853 413 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC9.74□□□□□ -0.85
Nup88Q8CEC0 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms