Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh5Q9QUM7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Gm26833-201ENSMUST00000180899 440 ntBASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh5Q9QUM7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Msh5Q9QUM7 Gm11421-201ENSMUST00000122124 294 ntBASIC19.08■□□□□ 0.64
Msh5Q9QUM7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Msh5Q9QUM7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh5Q9QUM7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh5Q9QUM7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Msh5Q9QUM7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh5Q9QUM7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh5Q9QUM7 Gm40848-201ENSMUST00000221998 324 ntBASIC19.07■□□□□ 0.64
Msh5Q9QUM7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh5Q9QUM7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh5Q9QUM7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh5Q9QUM7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh5Q9QUM7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh5Q9QUM7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Msh5Q9QUM7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh5Q9QUM7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh5Q9QUM7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh5Q9QUM7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Msh5Q9QUM7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh5Q9QUM7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh5Q9QUM7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Msh5Q9QUM7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.04■□□□□ 0.64
Msh5Q9QUM7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms