Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx5Q9JL61 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx5Q9JL61 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.95■□□□□ 0.78
Rfx5Q9JL61 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rfx5Q9JL61 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx5Q9JL61 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx5Q9JL61 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx5Q9JL61 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx5Q9JL61 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx5Q9JL61 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx5Q9JL61 BC021767-201ENSMUST00000126387 1716 ntBASIC19.93■□□□□ 0.78
Rfx5Q9JL61 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx5Q9JL61 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx5Q9JL61 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx5Q9JL61 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.93■□□□□ 0.78
Rfx5Q9JL61 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx5Q9JL61 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.93■□□□□ 0.78
Rfx5Q9JL61 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.93■□□□□ 0.78
Rfx5Q9JL61 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx5Q9JL61 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Rfx5Q9JL61 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx5Q9JL61 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx5Q9JL61 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx5Q9JL61 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Gm6365-201ENSMUST00000054711 744 ntBASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.91■□□□□ 0.78
Rfx5Q9JL61 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx5Q9JL61 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx5Q9JL61 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Rfx5Q9JL61 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.9■□□□□ 0.78
Rfx5Q9JL61 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.9■□□□□ 0.78
Rfx5Q9JL61 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx5Q9JL61 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx5Q9JL61 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx5Q9JL61 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx5Q9JL61 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx5Q9JL61 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Rfx5Q9JL61 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms