Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpf2Q9JJ80 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpf2Q9JJ80 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpf2Q9JJ80 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.01■□□□□ 0.79
Rpf2Q9JJ80 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpf2Q9JJ80 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpf2Q9JJ80 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpf2Q9JJ80 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20■□□□□ 0.79
Rpf2Q9JJ80 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20■□□□□ 0.79
Rpf2Q9JJ80 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpf2Q9JJ80 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpf2Q9JJ80 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpf2Q9JJ80 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpf2Q9JJ80 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpf2Q9JJ80 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpf2Q9JJ80 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rpf2Q9JJ80 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpf2Q9JJ80 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpf2Q9JJ80 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpf2Q9JJ80 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpf2Q9JJ80 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpf2Q9JJ80 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpf2Q9JJ80 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpf2Q9JJ80 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpf2Q9JJ80 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.98■□□□□ 0.79
Rpf2Q9JJ80 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpf2Q9JJ80 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Rpf2Q9JJ80 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpf2Q9JJ80 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.98■□□□□ 0.79
Rpf2Q9JJ80 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpf2Q9JJ80 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpf2Q9JJ80 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpf2Q9JJ80 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpf2Q9JJ80 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rpf2Q9JJ80 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpf2Q9JJ80 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpf2Q9JJ80 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpf2Q9JJ80 Gm12251-201ENSMUST00000117893 792 ntBASIC19.96■□□□□ 0.79
Rpf2Q9JJ80 Gm7860-201ENSMUST00000121190 879 ntBASIC19.96■□□□□ 0.79
Rpf2Q9JJ80 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpf2Q9JJ80 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpf2Q9JJ80 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpf2Q9JJ80 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpf2Q9JJ80 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.95■□□□□ 0.78
Rpf2Q9JJ80 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpf2Q9JJ80 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpf2Q9JJ80 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.95■□□□□ 0.78
Rpf2Q9JJ80 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpf2Q9JJ80 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rpf2Q9JJ80 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rpf2Q9JJ80 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rpf2Q9JJ80 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpf2Q9JJ80 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Gm43137-201ENSMUST00000198052 594 ntBASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpf2Q9JJ80 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpf2Q9JJ80 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms