Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtp4Q9ER80 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtp4Q9ER80 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtp4Q9ER80 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtp4Q9ER80 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtp4Q9ER80 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtp4Q9ER80 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rtp4Q9ER80 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtp4Q9ER80 Gm7514-201ENSMUST00000209475 934 ntBASIC17.58■□□□□ 0.4
Rtp4Q9ER80 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.58■□□□□ 0.4
Rtp4Q9ER80 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.58■□□□□ 0.4
Rtp4Q9ER80 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtp4Q9ER80 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rtp4Q9ER80 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtp4Q9ER80 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtp4Q9ER80 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Gm10602-201ENSMUST00000098239 609 ntBASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Rtp4Q9ER80 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtp4Q9ER80 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 BC021767-201ENSMUST00000126387 1716 ntBASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 AA386476-201ENSMUST00000098781 1665 ntBASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtp4Q9ER80 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtp4Q9ER80 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtp4Q9ER80 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtp4Q9ER80 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rtp4Q9ER80 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtp4Q9ER80 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rtp4Q9ER80 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtp4Q9ER80 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtp4Q9ER80 Gm27011-201ENSMUST00000182352 972 ntBASIC17.53■□□□□ 0.4
Rtp4Q9ER80 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.53■□□□□ 0.4
Rtp4Q9ER80 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtp4Q9ER80 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtp4Q9ER80 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Gm12933-201ENSMUST00000120203 872 ntBASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Gm38205-201ENSMUST00000192243 258 ntBASIC17.52■□□□□ 0.4
Rtp4Q9ER80 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms