Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Upf1Q9EPU0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.66■■□□□ 1.06
Upf1Q9EPU0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.66■■□□□ 1.06
Upf1Q9EPU0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Upf1Q9EPU0 Gm10138-203ENSMUST00000206952 366 ntBASIC21.66■■□□□ 1.06
Upf1Q9EPU0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Upf1Q9EPU0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Upf1Q9EPU0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Upf1Q9EPU0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Upf1Q9EPU0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Upf1Q9EPU0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Upf1Q9EPU0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upf1Q9EPU0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upf1Q9EPU0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upf1Q9EPU0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upf1Q9EPU0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upf1Q9EPU0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upf1Q9EPU0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Upf1Q9EPU0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Upf1Q9EPU0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Upf1Q9EPU0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Upf1Q9EPU0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Upf1Q9EPU0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Upf1Q9EPU0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.64■■□□□ 1.05
Upf1Q9EPU0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.64■■□□□ 1.05
Upf1Q9EPU0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Upf1Q9EPU0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Upf1Q9EPU0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Upf1Q9EPU0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Upf1Q9EPU0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upf1Q9EPU0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Upf1Q9EPU0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upf1Q9EPU0 Gm18958-201ENSMUST00000174258 762 ntBASIC21.63■■□□□ 1.05
Upf1Q9EPU0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Upf1Q9EPU0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Upf1Q9EPU0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upf1Q9EPU0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Upf1Q9EPU0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Upf1Q9EPU0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upf1Q9EPU0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upf1Q9EPU0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upf1Q9EPU0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upf1Q9EPU0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Upf1Q9EPU0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.62■■□□□ 1.05
Upf1Q9EPU0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Gm27463-201ENSMUST00000183569 57 ntBASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC21.61■■□□□ 1.05
Upf1Q9EPU0 AW822252-206ENSMUST00000208904 237 ntBASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Upf1Q9EPU0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upf1Q9EPU0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upf1Q9EPU0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upf1Q9EPU0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upf1Q9EPU0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Upf1Q9EPU0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Upf1Q9EPU0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upf1Q9EPU0 Gm15375-201ENSMUST00000119510 849 ntBASIC21.59■■□□□ 1.05
Upf1Q9EPU0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Upf1Q9EPU0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
Upf1Q9EPU0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upf1Q9EPU0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.59■■□□□ 1.05
Upf1Q9EPU0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upf1Q9EPU0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Upf1Q9EPU0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.58■■□□□ 1.05
Upf1Q9EPU0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.58■■□□□ 1.05
Upf1Q9EPU0 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.58■■□□□ 1.05
Upf1Q9EPU0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Upf1Q9EPU0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.58■■□□□ 1.05
Upf1Q9EPU0 Gm2274-201ENSMUST00000184539 609 ntBASIC21.58■■□□□ 1.05
Upf1Q9EPU0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Upf1Q9EPU0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.58■■□□□ 1.04
Upf1Q9EPU0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Upf1Q9EPU0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Upf1Q9EPU0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Upf1Q9EPU0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
Upf1Q9EPU0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Upf1Q9EPU0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Upf1Q9EPU0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Upf1Q9EPU0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Upf1Q9EPU0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms