Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgn3Q9DCB1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.68■□□□□ 0.42
Hmgn3Q9DCB1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgn3Q9DCB1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgn3Q9DCB1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgn3Q9DCB1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Hmgn3Q9DCB1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn3Q9DCB1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn3Q9DCB1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn3Q9DCB1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn3Q9DCB1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn3Q9DCB1 Gm10232-201ENSMUST00000089221 720 ntBASIC17.67■□□□□ 0.42
Hmgn3Q9DCB1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Hmgn3Q9DCB1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn3Q9DCB1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn3Q9DCB1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgn3Q9DCB1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.66■□□□□ 0.42
Hmgn3Q9DCB1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn3Q9DCB1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn3Q9DCB1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn3Q9DCB1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn3Q9DCB1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Hmgn3Q9DCB1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn3Q9DCB1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmgn3Q9DCB1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmgn3Q9DCB1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Hmgn3Q9DCB1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.64■□□□□ 0.42
Hmgn3Q9DCB1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmgn3Q9DCB1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Hmgn3Q9DCB1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn3Q9DCB1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn3Q9DCB1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn3Q9DCB1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hmgn3Q9DCB1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hmgn3Q9DCB1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn3Q9DCB1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn3Q9DCB1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.61■□□□□ 0.41
Hmgn3Q9DCB1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn3Q9DCB1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms