Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rrp8Q9DB85 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rrp8Q9DB85 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.45■□□□□ 0.54
Rrp8Q9DB85 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rrp8Q9DB85 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rrp8Q9DB85 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rrp8Q9DB85 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rrp8Q9DB85 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Gm44549-201ENSMUST00000208351 577 ntBASIC18.44■□□□□ 0.54
Rrp8Q9DB85 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rrp8Q9DB85 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rrp8Q9DB85 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rrp8Q9DB85 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rrp8Q9DB85 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rrp8Q9DB85 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.43■□□□□ 0.54
Rrp8Q9DB85 Gm18666-201ENSMUST00000190039 958 ntBASIC18.43■□□□□ 0.54
Rrp8Q9DB85 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.43■□□□□ 0.54
Rrp8Q9DB85 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rrp8Q9DB85 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rrp8Q9DB85 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rrp8Q9DB85 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rrp8Q9DB85 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.42■□□□□ 0.54
Rrp8Q9DB85 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rrp8Q9DB85 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rrp8Q9DB85 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rrp8Q9DB85 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rrp8Q9DB85 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rrp8Q9DB85 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rrp8Q9DB85 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rrp8Q9DB85 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.41■□□□□ 0.54
Rrp8Q9DB85 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rrp8Q9DB85 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rrp8Q9DB85 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rrp8Q9DB85 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp8Q9DB85 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp8Q9DB85 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp8Q9DB85 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp8Q9DB85 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp8Q9DB85 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rrp8Q9DB85 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp8Q9DB85 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp8Q9DB85 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp8Q9DB85 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rrp8Q9DB85 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp8Q9DB85 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Gm11249-201ENSMUST00000117071 859 ntBASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Gm13836-201ENSMUST00000121159 501 ntBASIC18.38■□□□□ 0.53
Rrp8Q9DB85 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Gm7977-201ENSMUST00000193787 748 ntBASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.38■□□□□ 0.53
Rrp8Q9DB85 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp8Q9DB85 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms