Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf3c6Q9D8P7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf3c6Q9D8P7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf3c6Q9D8P7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 Gm38205-201ENSMUST00000192243 258 ntBASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
Gtf3c6Q9D8P7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c6Q9D8P7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c6Q9D8P7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.06■□□□□ 0.8
Gtf3c6Q9D8P7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gtf3c6Q9D8P7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c6Q9D8P7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c6Q9D8P7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c6Q9D8P7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c6Q9D8P7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gtf3c6Q9D8P7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf3c6Q9D8P7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Gtf3c6Q9D8P7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf3c6Q9D8P7 Gm37812-201ENSMUST00000195216 2475 ntBASIC20.04■□□□□ 0.8
Gtf3c6Q9D8P7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c6Q9D8P7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c6Q9D8P7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c6Q9D8P7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c6Q9D8P7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Gtf3c6Q9D8P7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.04■□□□□ 0.8
Gtf3c6Q9D8P7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.04■□□□□ 0.8
Gtf3c6Q9D8P7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c6Q9D8P7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c6Q9D8P7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf3c6Q9D8P7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf3c6Q9D8P7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf3c6Q9D8P7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gtf3c6Q9D8P7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Gtf3c6Q9D8P7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gtf3c6Q9D8P7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Gtf3c6Q9D8P7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.02■□□□□ 0.79
Gtf3c6Q9D8P7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Gtf3c6Q9D8P7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.02■□□□□ 0.79
Gtf3c6Q9D8P7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf3c6Q9D8P7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf3c6Q9D8P7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf3c6Q9D8P7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Gtf3c6Q9D8P7 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.01■□□□□ 0.79
Gtf3c6Q9D8P7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf3c6Q9D8P7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf3c6Q9D8P7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.01■□□□□ 0.79
Gtf3c6Q9D8P7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf3c6Q9D8P7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms