Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldnd1Q9CQX5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldnd1Q9CQX5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Cldnd1Q9CQX5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cldnd1Q9CQX5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cldnd1Q9CQX5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.39■□□□□ 0.69
Cldnd1Q9CQX5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldnd1Q9CQX5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldnd1Q9CQX5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldnd1Q9CQX5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Cldnd1Q9CQX5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cldnd1Q9CQX5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldnd1Q9CQX5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldnd1Q9CQX5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cldnd1Q9CQX5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.36■□□□□ 0.69
Cldnd1Q9CQX5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Cldnd1Q9CQX5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldnd1Q9CQX5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldnd1Q9CQX5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldnd1Q9CQX5 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.35■□□□□ 0.69
Cldnd1Q9CQX5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldnd1Q9CQX5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldnd1Q9CQX5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldnd1Q9CQX5 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.35■□□□□ 0.69
Cldnd1Q9CQX5 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.35■□□□□ 0.69
Cldnd1Q9CQX5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldnd1Q9CQX5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldnd1Q9CQX5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.33■□□□□ 0.69
Cldnd1Q9CQX5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldnd1Q9CQX5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cldnd1Q9CQX5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldnd1Q9CQX5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldnd1Q9CQX5 Gm10819-201ENSMUST00000099988 561 ntBASIC19.33■□□□□ 0.68
Cldnd1Q9CQX5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldnd1Q9CQX5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldnd1Q9CQX5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldnd1Q9CQX5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldnd1Q9CQX5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cldnd1Q9CQX5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Gm11927-201ENSMUST00000118472 759 ntBASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Gm21362-201ENSMUST00000194272 928 ntBASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Flg-201ENSMUST00000050758 1488 ntBASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.32■□□□□ 0.68
Cldnd1Q9CQX5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldnd1Q9CQX5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldnd1Q9CQX5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldnd1Q9CQX5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldnd1Q9CQX5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldnd1Q9CQX5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.31■□□□□ 0.68
Cldnd1Q9CQX5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms