Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm7Q9CQQ8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm7Q9CQQ8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm7Q9CQQ8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lsm7Q9CQQ8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lsm7Q9CQQ8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm7Q9CQQ8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lsm7Q9CQQ8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lsm7Q9CQQ8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lsm7Q9CQQ8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lsm7Q9CQQ8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
Lsm7Q9CQQ8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lsm7Q9CQQ8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Gm26971-201ENSMUST00000182423 1072 ntBASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Gm4968-201ENSMUST00000071458 858 ntBASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lsm7Q9CQQ8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lsm7Q9CQQ8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm7Q9CQQ8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm7Q9CQQ8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm7Q9CQQ8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm7Q9CQQ8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm7Q9CQQ8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm7Q9CQQ8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lsm7Q9CQQ8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lsm7Q9CQQ8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm7Q9CQQ8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm7Q9CQQ8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm7Q9CQQ8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Lsm7Q9CQQ8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.97■□□□□ 0.63
Lsm7Q9CQQ8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.97■□□□□ 0.63
Lsm7Q9CQQ8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm7Q9CQQ8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm7Q9CQQ8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm7Q9CQQ8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lsm7Q9CQQ8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Lsm7Q9CQQ8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lsm7Q9CQQ8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.96■□□□□ 0.63
Lsm7Q9CQQ8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lsm7Q9CQQ8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lsm7Q9CQQ8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms