Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim16Q99PP9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim16Q99PP9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim16Q99PP9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim16Q99PP9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim16Q99PP9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim16Q99PP9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim16Q99PP9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim16Q99PP9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.32■□□□□ 0.52
Trim16Q99PP9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim16Q99PP9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim16Q99PP9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim16Q99PP9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim16Q99PP9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim16Q99PP9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim16Q99PP9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim16Q99PP9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.32■□□□□ 0.52
Trim16Q99PP9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim16Q99PP9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim16Q99PP9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim16Q99PP9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim16Q99PP9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim16Q99PP9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim16Q99PP9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.31■□□□□ 0.52
Trim16Q99PP9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
Trim16Q99PP9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim16Q99PP9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim16Q99PP9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim16Q99PP9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim16Q99PP9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim16Q99PP9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim16Q99PP9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim16Q99PP9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim16Q99PP9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Trim16Q99PP9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trim16Q99PP9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim16Q99PP9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim16Q99PP9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim16Q99PP9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim16Q99PP9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.29■□□□□ 0.52
Trim16Q99PP9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim16Q99PP9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim16Q99PP9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim16Q99PP9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim16Q99PP9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim16Q99PP9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trim16Q99PP9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trim16Q99PP9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim16Q99PP9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Trim16Q99PP9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trim16Q99PP9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim16Q99PP9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim16Q99PP9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim16Q99PP9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms