Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr3Q99MB1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tlr3Q99MB1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tlr3Q99MB1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 BC021767-201ENSMUST00000126387 1716 ntBASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tlr3Q99MB1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tlr3Q99MB1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.16■□□□□ 0.82
Tlr3Q99MB1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.16■□□□□ 0.82
Tlr3Q99MB1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.16■□□□□ 0.82
Tlr3Q99MB1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tlr3Q99MB1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tlr3Q99MB1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tlr3Q99MB1 Gm13234-201ENSMUST00000120010 747 ntBASIC20.15■□□□□ 0.82
Tlr3Q99MB1 Gm10033-202ENSMUST00000211874 928 ntBASIC20.15■□□□□ 0.82
Tlr3Q99MB1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tlr3Q99MB1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Tlr3Q99MB1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tlr3Q99MB1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tlr3Q99MB1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tlr3Q99MB1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tlr3Q99MB1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tlr3Q99MB1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Tlr3Q99MB1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tlr3Q99MB1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tlr3Q99MB1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Tlr3Q99MB1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tlr3Q99MB1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tlr3Q99MB1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tlr3Q99MB1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tlr3Q99MB1 Gm13146-201ENSMUST00000118508 780 ntBASIC20.14■□□□□ 0.81
Tlr3Q99MB1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.14■□□□□ 0.81
Tlr3Q99MB1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tlr3Q99MB1 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.14■□□□□ 0.81
Tlr3Q99MB1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tlr3Q99MB1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tlr3Q99MB1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Tlr3Q99MB1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tlr3Q99MB1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tlr3Q99MB1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.12■□□□□ 0.81
Tlr3Q99MB1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.12■□□□□ 0.81
Tlr3Q99MB1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tlr3Q99MB1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tlr3Q99MB1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tlr3Q99MB1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tlr3Q99MB1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms