Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Scrt1Q99M85 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scrt1Q99M85 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Gm13534-201ENSMUST00000121169 513 ntBASIC16.45■□□□□ 0.22
Scrt1Q99M85 Gm27275-201ENSMUST00000184318 272 ntBASIC16.45■□□□□ 0.22
Scrt1Q99M85 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scrt1Q99M85 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.45■□□□□ 0.22
Scrt1Q99M85 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Scrt1Q99M85 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Scrt1Q99M85 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.44■□□□□ 0.22
Scrt1Q99M85 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scrt1Q99M85 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scrt1Q99M85 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scrt1Q99M85 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scrt1Q99M85 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scrt1Q99M85 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Scrt1Q99M85 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scrt1Q99M85 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scrt1Q99M85 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.44■□□□□ 0.22
Scrt1Q99M85 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scrt1Q99M85 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scrt1Q99M85 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scrt1Q99M85 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.43■□□□□ 0.22
Scrt1Q99M85 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scrt1Q99M85 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scrt1Q99M85 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scrt1Q99M85 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scrt1Q99M85 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scrt1Q99M85 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Scrt1Q99M85 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Gm13836-201ENSMUST00000121159 501 ntBASIC16.42■□□□□ 0.22
Scrt1Q99M85 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scrt1Q99M85 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.42■□□□□ 0.22
Scrt1Q99M85 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.41■□□□□ 0.22
Scrt1Q99M85 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scrt1Q99M85 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scrt1Q99M85 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scrt1Q99M85 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scrt1Q99M85 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.4■□□□□ 0.22
Scrt1Q99M85 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scrt1Q99M85 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scrt1Q99M85 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scrt1Q99M85 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scrt1Q99M85 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scrt1Q99M85 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scrt1Q99M85 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scrt1Q99M85 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms