Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha3Q91Y16 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Pcdha3Q91Y16 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdha3Q91Y16 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdha3Q91Y16 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdha3Q91Y16 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdha3Q91Y16 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha3Q91Y16 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdha3Q91Y16 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha3Q91Y16 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha3Q91Y16 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha3Q91Y16 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha3Q91Y16 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha3Q91Y16 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha3Q91Y16 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha3Q91Y16 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Gm26571-201ENSMUST00000181399 666 ntBASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha3Q91Y16 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Gm27405-201ENSMUST00000184201 112 ntBASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha3Q91Y16 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha3Q91Y16 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Gm7860-201ENSMUST00000121190 879 ntBASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms