Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb18Q91Y02 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdhb18Q91Y02 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb18Q91Y02 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb18Q91Y02 Rab3c-203ENSMUST00000224180 967 ntBASIC19.67■□□□□ 0.74
Pcdhb18Q91Y02 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb18Q91Y02 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb18Q91Y02 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Pcdhb18Q91Y02 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb18Q91Y02 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb18Q91Y02 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb18Q91Y02 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhb18Q91Y02 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Gm26524-201ENSMUST00000192339 390 ntBASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Trmt13-210ENSMUST00000198454 880 ntBASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb18Q91Y02 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Gm10252-201ENSMUST00000209541 832 ntBASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb18Q91Y02 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb18Q91Y02 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb18Q91Y02 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb18Q91Y02 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb18Q91Y02 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb18Q91Y02 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Gm10812-201ENSMUST00000099864 546 ntBASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb18Q91Y02 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb18Q91Y02 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb18Q91Y02 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdhb18Q91Y02 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhb18Q91Y02 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb18Q91Y02 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb18Q91Y02 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb18Q91Y02 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb18Q91Y02 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb18Q91Y02 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb18Q91Y02 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb18Q91Y02 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms