Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga11Q91XY8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 BC021767-201ENSMUST00000126387 1716 ntBASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga11Q91XY8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhga11Q91XY8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Pcdhga11Q91XY8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhga11Q91XY8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhga11Q91XY8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Pcdhga11Q91XY8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Pcdhga11Q91XY8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga11Q91XY8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.08■□□□□ 0.48
Pcdhga11Q91XY8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhga11Q91XY8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhga11Q91XY8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhga11Q91XY8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga11Q91XY8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga11Q91XY8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga11Q91XY8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga11Q91XY8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga11Q91XY8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 Gm26833-201ENSMUST00000180899 440 ntBASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga11Q91XY8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhga11Q91XY8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms