Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.35■□□□□ 0.53
Cdhr1Q8VHP6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr1Q8VHP6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr1Q8VHP6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr1Q8VHP6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr1Q8VHP6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cdhr1Q8VHP6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr1Q8VHP6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr1Q8VHP6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr1Q8VHP6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr1Q8VHP6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.34■□□□□ 0.53
Cdhr1Q8VHP6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr1Q8VHP6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr1Q8VHP6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.33■□□□□ 0.53
Cdhr1Q8VHP6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdhr1Q8VHP6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.33■□□□□ 0.53
Cdhr1Q8VHP6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdhr1Q8VHP6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Cdhr1Q8VHP6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Rab3c-203ENSMUST00000224180 967 ntBASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdhr1Q8VHP6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdhr1Q8VHP6 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.32■□□□□ 0.52
Cdhr1Q8VHP6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdhr1Q8VHP6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.32■□□□□ 0.52
Cdhr1Q8VHP6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.32■□□□□ 0.52
Cdhr1Q8VHP6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdhr1Q8VHP6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdhr1Q8VHP6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdhr1Q8VHP6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cdhr1Q8VHP6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.32■□□□□ 0.52
Cdhr1Q8VHP6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdhr1Q8VHP6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr1Q8VHP6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Gm22240-201ENSMUST00000175225 82 ntBASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr1Q8VHP6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Gm37856-201ENSMUST00000191634 999 ntBASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.29■□□□□ 0.52
Cdhr1Q8VHP6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cdhr1Q8VHP6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cdhr1Q8VHP6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr1Q8VHP6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr1Q8VHP6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr1Q8VHP6 Gm8520-201ENSMUST00000186517 868 ntBASIC18.28■□□□□ 0.52
Cdhr1Q8VHP6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr1Q8VHP6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr1Q8VHP6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr1Q8VHP6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms