Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Smad6-203ENSMUST00000179458 273 ntBASIC18.06■□□□□ 0.48
Rnf8Q8VC56 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf8Q8VC56 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rnf8Q8VC56 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf8Q8VC56 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rnf8Q8VC56 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.02■□□□□ 0.48
Rnf8Q8VC56 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf8Q8VC56 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf8Q8VC56 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
Rnf8Q8VC56 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
Rnf8Q8VC56 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf8Q8VC56 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
Rnf8Q8VC56 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf8Q8VC56 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf8Q8VC56 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rnf8Q8VC56 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf8Q8VC56 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf8Q8VC56 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf8Q8VC56 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf8Q8VC56 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms