Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Mir7071-201ENSMUST00000184847 69 ntBASIC26.9■■□□□ 1.9
Cd109Q8R422 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cd109Q8R422 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cd109Q8R422 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cd109Q8R422 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cd109Q8R422 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC26.9■■□□□ 1.9
Cd109Q8R422 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
Cd109Q8R422 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC26.9■■□□□ 1.9
Cd109Q8R422 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC26.9■■□□□ 1.9
Cd109Q8R422 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Cd109Q8R422 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Cd109Q8R422 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
Cd109Q8R422 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC26.89■■□□□ 1.9
Cd109Q8R422 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Cd109Q8R422 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Cd109Q8R422 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
Cd109Q8R422 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cd109Q8R422 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Cd109Q8R422 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cd109Q8R422 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Cd109Q8R422 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC26.88■■□□□ 1.89
Cd109Q8R422 Mir6982-201ENSMUST00000184354 68 ntBASIC26.88■■□□□ 1.89
Cd109Q8R422 Gm18666-201ENSMUST00000190039 958 ntBASIC26.88■■□□□ 1.89
Cd109Q8R422 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cd109Q8R422 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Cd109Q8R422 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Cd109Q8R422 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cd109Q8R422 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cd109Q8R422 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cd109Q8R422 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cd109Q8R422 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cd109Q8R422 AC163280.1-201ENSMUST00000228194 1100 ntBASIC26.87■■□□□ 1.89
Cd109Q8R422 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cd109Q8R422 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cd109Q8R422 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC26.86■■□□□ 1.89
Cd109Q8R422 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cd109Q8R422 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cd109Q8R422 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cd109Q8R422 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Cd109Q8R422 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cd109Q8R422 Gm15847-201ENSMUST00000121417 1065 ntBASIC26.86■■□□□ 1.89
Cd109Q8R422 Wnt10b-205ENSMUST00000226846 1204 ntBASIC26.86■■□□□ 1.89
Cd109Q8R422 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cd109Q8R422 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cd109Q8R422 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Cd109Q8R422 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC26.86■■□□□ 1.89
Cd109Q8R422 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Cd109Q8R422 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cd109Q8R422 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cd109Q8R422 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cd109Q8R422 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cd109Q8R422 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC26.85■■□□□ 1.89
Cd109Q8R422 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
Cd109Q8R422 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
Cd109Q8R422 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cd109Q8R422 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cd109Q8R422 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cd109Q8R422 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cd109Q8R422 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cd109Q8R422 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cd109Q8R422 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC26.84■■□□□ 1.89
Cd109Q8R422 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Cd109Q8R422 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Cd109Q8R422 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cd109Q8R422 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cd109Q8R422 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cd109Q8R422 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Cd109Q8R422 AC126028.2-201ENSMUST00000228100 1833 ntBASIC26.84■■□□□ 1.89
Cd109Q8R422 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cd109Q8R422 Nrn1-203ENSMUST00000223611 1443 ntBASIC26.83■■□□□ 1.89
Cd109Q8R422 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cd109Q8R422 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Cd109Q8R422 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cd109Q8R422 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cd109Q8R422 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Cd109Q8R422 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.88
Cd109Q8R422 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cd109Q8R422 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cd109Q8R422 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
Cd109Q8R422 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cd109Q8R422 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cd109Q8R422 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC26.82■■□□□ 1.88
Cd109Q8R422 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
Cd109Q8R422 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Cd109Q8R422 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cd109Q8R422 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cd109Q8R422 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cd109Q8R422 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Cd109Q8R422 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Cd109Q8R422 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC26.81■■□□□ 1.88
Cd109Q8R422 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cd109Q8R422 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Cd109Q8R422 AC153881.1-201ENSMUST00000214448 284 ntBASIC26.81■■□□□ 1.88
Cd109Q8R422 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cd109Q8R422 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Cd109Q8R422 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Cd109Q8R422 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Cd109Q8R422 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Cd109Q8R422 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cd109Q8R422 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms