Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxe1Q8R2I0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Foxe1Q8R2I0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxe1Q8R2I0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Foxe1Q8R2I0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Foxe1Q8R2I0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxe1Q8R2I0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxe1Q8R2I0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxe1Q8R2I0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Foxe1Q8R2I0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Foxe1Q8R2I0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Foxe1Q8R2I0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.52■□□□□ 0.72
Foxe1Q8R2I0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Foxe1Q8R2I0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Foxe1Q8R2I0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.52■□□□□ 0.72
Foxe1Q8R2I0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Foxe1Q8R2I0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Foxe1Q8R2I0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Foxe1Q8R2I0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Foxe1Q8R2I0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Foxe1Q8R2I0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 Gm10517-202ENSMUST00000192970 758 ntBASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxe1Q8R2I0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Gm21814-202ENSMUST00000203277 873 ntBASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Foxe1Q8R2I0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxe1Q8R2I0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Foxe1Q8R2I0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxe1Q8R2I0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Foxe1Q8R2I0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.48■□□□□ 0.71
Foxe1Q8R2I0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxe1Q8R2I0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxe1Q8R2I0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Foxe1Q8R2I0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Foxe1Q8R2I0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Foxe1Q8R2I0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Foxe1Q8R2I0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Foxe1Q8R2I0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Foxe1Q8R2I0 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.47■□□□□ 0.71
Foxe1Q8R2I0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Foxe1Q8R2I0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Foxe1Q8R2I0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Foxe1Q8R2I0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.47■□□□□ 0.71
Foxe1Q8R2I0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Foxe1Q8R2I0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxe1Q8R2I0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxe1Q8R2I0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxe1Q8R2I0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Foxe1Q8R2I0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxe1Q8R2I0 Gm13559-201ENSMUST00000120476 863 ntBASIC19.46■□□□□ 0.71
Foxe1Q8R2I0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms