Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
H2afjQ8R1M2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.45■□□□□ 0.38
H2afjQ8R1M2 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.45■□□□□ 0.38
H2afjQ8R1M2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afjQ8R1M2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
H2afjQ8R1M2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
H2afjQ8R1M2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afjQ8R1M2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
H2afjQ8R1M2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afjQ8R1M2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
H2afjQ8R1M2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
H2afjQ8R1M2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
H2afjQ8R1M2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
H2afjQ8R1M2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afjQ8R1M2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afjQ8R1M2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afjQ8R1M2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afjQ8R1M2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.43■□□□□ 0.38
H2afjQ8R1M2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.43■□□□□ 0.38
H2afjQ8R1M2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
H2afjQ8R1M2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
H2afjQ8R1M2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afjQ8R1M2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afjQ8R1M2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afjQ8R1M2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
H2afjQ8R1M2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.41■□□□□ 0.38
H2afjQ8R1M2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
H2afjQ8R1M2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afjQ8R1M2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afjQ8R1M2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.41■□□□□ 0.38
H2afjQ8R1M2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.41■□□□□ 0.38
H2afjQ8R1M2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
H2afjQ8R1M2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2afjQ8R1M2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Spcs1-204ENSMUST00000226782 949 ntBASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
H2afjQ8R1M2 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.39■□□□□ 0.38
H2afjQ8R1M2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
H2afjQ8R1M2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
H2afjQ8R1M2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
H2afjQ8R1M2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Serp2-204ENSMUST00000228055 705 ntBASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2afjQ8R1M2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afjQ8R1M2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afjQ8R1M2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afjQ8R1M2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H2afjQ8R1M2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
H2afjQ8R1M2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2afjQ8R1M2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms