Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 Gm45417-201ENSMUST00000209533 758 ntBASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cchcr1Q8K2I2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.23■■□□□ 1.15
Cchcr1Q8K2I2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cchcr1Q8K2I2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cchcr1Q8K2I2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cchcr1Q8K2I2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cchcr1Q8K2I2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cchcr1Q8K2I2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cchcr1Q8K2I2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cchcr1Q8K2I2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cchcr1Q8K2I2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cchcr1Q8K2I2 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.22■■□□□ 1.15
Cchcr1Q8K2I2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cchcr1Q8K2I2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cchcr1Q8K2I2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cchcr1Q8K2I2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cchcr1Q8K2I2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cchcr1Q8K2I2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Cchcr1Q8K2I2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
Cchcr1Q8K2I2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cchcr1Q8K2I2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cchcr1Q8K2I2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cchcr1Q8K2I2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cchcr1Q8K2I2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cchcr1Q8K2I2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
Cchcr1Q8K2I2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Cchcr1Q8K2I2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cchcr1Q8K2I2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 Gm40848-201ENSMUST00000221998 324 ntBASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cchcr1Q8K2I2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cchcr1Q8K2I2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cchcr1Q8K2I2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cchcr1Q8K2I2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cchcr1Q8K2I2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cchcr1Q8K2I2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cchcr1Q8K2I2 Gm43017-201ENSMUST00000198296 752 ntBASIC22.18■■□□□ 1.14
Cchcr1Q8K2I2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Cchcr1Q8K2I2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cchcr1Q8K2I2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cchcr1Q8K2I2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cchcr1Q8K2I2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cchcr1Q8K2I2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cchcr1Q8K2I2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cchcr1Q8K2I2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cchcr1Q8K2I2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cchcr1Q8K2I2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cchcr1Q8K2I2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cchcr1Q8K2I2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.16■■□□□ 1.14
Cchcr1Q8K2I2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Cchcr1Q8K2I2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cchcr1Q8K2I2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms