Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scara5Q8K299 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scara5Q8K299 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.83■□□□□ 0.6
Scara5Q8K299 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.83■□□□□ 0.6
Scara5Q8K299 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.83■□□□□ 0.6
Scara5Q8K299 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Scara5Q8K299 Iqck-206ENSMUST00000208658 2891 ntBASIC18.83■□□□□ 0.6
Scara5Q8K299 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Scara5Q8K299 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scara5Q8K299 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scara5Q8K299 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scara5Q8K299 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Scara5Q8K299 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Scara5Q8K299 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.82■□□□□ 0.6
Scara5Q8K299 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.82■□□□□ 0.6
Scara5Q8K299 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.82■□□□□ 0.6
Scara5Q8K299 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scara5Q8K299 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scara5Q8K299 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scara5Q8K299 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scara5Q8K299 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scara5Q8K299 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Scara5Q8K299 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Scara5Q8K299 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Scara5Q8K299 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.81■□□□□ 0.6
Scara5Q8K299 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Scara5Q8K299 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Scara5Q8K299 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Scara5Q8K299 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Scara5Q8K299 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scara5Q8K299 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.8■□□□□ 0.6
Scara5Q8K299 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scara5Q8K299 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Scara5Q8K299 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Scara5Q8K299 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scara5Q8K299 Golph3-202ENSMUST00000226517 2359 ntBASIC18.8■□□□□ 0.6
Scara5Q8K299 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scara5Q8K299 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.8■□□□□ 0.6
Scara5Q8K299 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scara5Q8K299 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scara5Q8K299 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scara5Q8K299 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scara5Q8K299 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scara5Q8K299 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scara5Q8K299 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scara5Q8K299 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scara5Q8K299 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.8■□□□□ 0.6
Scara5Q8K299 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scara5Q8K299 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.79■□□□□ 0.6
Scara5Q8K299 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Scara5Q8K299 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scara5Q8K299 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scara5Q8K299 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Scara5Q8K299 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scara5Q8K299 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scara5Q8K299 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scara5Q8K299 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Scara5Q8K299 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scara5Q8K299 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scara5Q8K299 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scara5Q8K299 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Scara5Q8K299 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scara5Q8K299 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scara5Q8K299 Gm15565-201ENSMUST00000118890 427 ntBASIC18.77■□□□□ 0.6
Scara5Q8K299 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.77■□□□□ 0.6
Scara5Q8K299 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scara5Q8K299 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scara5Q8K299 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scara5Q8K299 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scara5Q8K299 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.77■□□□□ 0.59
Scara5Q8K299 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scara5Q8K299 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scara5Q8K299 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Scara5Q8K299 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scara5Q8K299 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.76■□□□□ 0.59
Scara5Q8K299 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scara5Q8K299 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms