Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1lQ8K1X4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nckap1lQ8K1X4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1lQ8K1X4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.25■□□□□ 0.51
Nckap1lQ8K1X4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.25■□□□□ 0.51
Nckap1lQ8K1X4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1lQ8K1X4 BC021767-201ENSMUST00000126387 1716 ntBASIC18.25■□□□□ 0.51
Nckap1lQ8K1X4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1lQ8K1X4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1lQ8K1X4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.25■□□□□ 0.51
Nckap1lQ8K1X4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1lQ8K1X4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1lQ8K1X4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Rarb-207ENSMUST00000225921 2756 ntBASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1lQ8K1X4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1lQ8K1X4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Gm26833-201ENSMUST00000180899 440 ntBASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.21■□□□□ 0.51
Nckap1lQ8K1X4 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.21■□□□□ 0.5
Nckap1lQ8K1X4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Gm40848-201ENSMUST00000221998 324 ntBASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Nckap1lQ8K1X4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms