Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd3Q8CIK8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd3Q8CIK8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.66■□□□□ 0.42
Rfwd3Q8CIK8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd3Q8CIK8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd3Q8CIK8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd3Q8CIK8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd3Q8CIK8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd3Q8CIK8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.66■□□□□ 0.42
Rfwd3Q8CIK8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfwd3Q8CIK8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Gm38205-201ENSMUST00000192243 258 ntBASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Gm10033-202ENSMUST00000211874 928 ntBASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfwd3Q8CIK8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rfwd3Q8CIK8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rfwd3Q8CIK8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfwd3Q8CIK8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfwd3Q8CIK8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfwd3Q8CIK8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.64■□□□□ 0.41
Rfwd3Q8CIK8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfwd3Q8CIK8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Rfwd3Q8CIK8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfwd3Q8CIK8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Rfwd3Q8CIK8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfwd3Q8CIK8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfwd3Q8CIK8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfwd3Q8CIK8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Rfwd3Q8CIK8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfwd3Q8CIK8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfwd3Q8CIK8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfwd3Q8CIK8 Gm13146-201ENSMUST00000118508 780 ntBASIC17.63■□□□□ 0.41
Rfwd3Q8CIK8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfwd3Q8CIK8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rfwd3Q8CIK8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfwd3Q8CIK8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfwd3Q8CIK8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfwd3Q8CIK8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfwd3Q8CIK8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfwd3Q8CIK8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfwd3Q8CIK8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Rfwd3Q8CIK8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.61■□□□□ 0.41
Rfwd3Q8CIK8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.61■□□□□ 0.41
Rfwd3Q8CIK8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
Rfwd3Q8CIK8 Gm18671-201ENSMUST00000214826 683 ntBASIC17.61■□□□□ 0.41
Rfwd3Q8CIK8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.61■□□□□ 0.41
Rfwd3Q8CIK8 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.61■□□□□ 0.41
Rfwd3Q8CIK8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Gm10849-201ENSMUST00000100397 618 ntBASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfwd3Q8CIK8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfwd3Q8CIK8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms