Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rftn2Q8CHX7 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.07■□□□□ 0.8
Rftn2Q8CHX7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rftn2Q8CHX7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rftn2Q8CHX7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rftn2Q8CHX7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rftn2Q8CHX7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rftn2Q8CHX7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rftn2Q8CHX7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rftn2Q8CHX7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rftn2Q8CHX7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rftn2Q8CHX7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
Rftn2Q8CHX7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.06■□□□□ 0.8
Rftn2Q8CHX7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rftn2Q8CHX7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rftn2Q8CHX7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rftn2Q8CHX7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rftn2Q8CHX7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rftn2Q8CHX7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rftn2Q8CHX7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rftn2Q8CHX7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rftn2Q8CHX7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rftn2Q8CHX7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Rftn2Q8CHX7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rftn2Q8CHX7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rftn2Q8CHX7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.03■□□□□ 0.8
Rftn2Q8CHX7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.03■□□□□ 0.8
Rftn2Q8CHX7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.03■□□□□ 0.8
Rftn2Q8CHX7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rftn2Q8CHX7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.03■□□□□ 0.8
Rftn2Q8CHX7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rftn2Q8CHX7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rftn2Q8CHX7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.01■□□□□ 0.79
Rftn2Q8CHX7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rftn2Q8CHX7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms