Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Zc3h3Q8CHP0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Zc3h3Q8CHP0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zc3h3Q8CHP0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.53■□□□□ 0.56
Zc3h3Q8CHP0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Zc3h3Q8CHP0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Zc3h3Q8CHP0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Zc3h3Q8CHP0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.52■□□□□ 0.56
Zc3h3Q8CHP0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Zc3h3Q8CHP0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Zc3h3Q8CHP0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Gm9103-201ENSMUST00000119371 405 ntBASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Gm33142-201ENSMUST00000193913 867 ntBASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h3Q8CHP0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Gm10013-201ENSMUST00000106074 672 ntBASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Gm6345-202ENSMUST00000180900 204 ntBASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h3Q8CHP0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 AA414768-201ENSMUST00000121924 1257 ntBASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Zc3h3Q8CHP0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Zc3h3Q8CHP0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Odf3b-204ENSMUST00000227834 930 ntBASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.47■□□□□ 0.55
Zc3h3Q8CHP0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h3Q8CHP0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h3Q8CHP0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zc3h3Q8CHP0 Ank2-226ENSMUST00000189368 339 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms