Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Smad6-203ENSMUST00000179458 273 ntBASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox30Q8CGW4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox30Q8CGW4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox30Q8CGW4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sox30Q8CGW4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox30Q8CGW4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sox30Q8CGW4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox30Q8CGW4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sox30Q8CGW4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox30Q8CGW4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sox30Q8CGW4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sox30Q8CGW4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox30Q8CGW4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox30Q8CGW4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sox30Q8CGW4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sox30Q8CGW4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sox30Q8CGW4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sox30Q8CGW4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox30Q8CGW4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox30Q8CGW4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sox30Q8CGW4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox30Q8CGW4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox30Q8CGW4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox30Q8CGW4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox30Q8CGW4 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.63■□□□□ 0.89
Sox30Q8CGW4 Gm27801-201ENSMUST00000184174 223 ntBASIC20.63■□□□□ 0.89
Sox30Q8CGW4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox30Q8CGW4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Sox30Q8CGW4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox30Q8CGW4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox30Q8CGW4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox30Q8CGW4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Sox30Q8CGW4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sox30Q8CGW4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sox30Q8CGW4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sox30Q8CGW4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.62■□□□□ 0.89
Sox30Q8CGW4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sox30Q8CGW4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox30Q8CGW4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox30Q8CGW4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox30Q8CGW4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox30Q8CGW4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox30Q8CGW4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sox30Q8CGW4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox30Q8CGW4 Gm9847-201ENSMUST00000052528 599 ntBASIC20.61■□□□□ 0.89
Sox30Q8CGW4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sox30Q8CGW4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox30Q8CGW4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox30Q8CGW4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Sox30Q8CGW4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sox30Q8CGW4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox30Q8CGW4 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.6■□□□□ 0.89
Sox30Q8CGW4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox30Q8CGW4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.6■□□□□ 0.89
Sox30Q8CGW4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sox30Q8CGW4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox30Q8CGW4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.59■□□□□ 0.89
Sox30Q8CGW4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Sox30Q8CGW4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox30Q8CGW4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Sox30Q8CGW4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.59■□□□□ 0.89
Sox30Q8CGW4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox30Q8CGW4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms