Protein–RNA interactions for Protein: Q8CGF5

Tmem56, Transmembrane protein 56, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem56Q8CGF5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tmem56Q8CGF5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.14■□□□□ 0.17
Tmem56Q8CGF5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.14■□□□□ 0.17
Tmem56Q8CGF5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem56Q8CGF5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.14■□□□□ 0.17
Tmem56Q8CGF5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tmem56Q8CGF5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Gm9988-201ENSMUST00000069786 435 ntBASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tmem56Q8CGF5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Tmem56Q8CGF5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem56Q8CGF5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem56Q8CGF5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem56Q8CGF5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem56Q8CGF5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.11■□□□□ 0.17
Tmem56Q8CGF5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Tmem56Q8CGF5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem56Q8CGF5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tmem56Q8CGF5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tmem56Q8CGF5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Tmem56Q8CGF5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tmem56Q8CGF5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tmem56Q8CGF5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tmem56Q8CGF5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Tmem56Q8CGF5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.08■□□□□ 0.17
Tmem56Q8CGF5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tmem56Q8CGF5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tmem56Q8CGF5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tmem56Q8CGF5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tmem56Q8CGF5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem56Q8CGF5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem56Q8CGF5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem56Q8CGF5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem56Q8CGF5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem56Q8CGF5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem56Q8CGF5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.08■□□□□ 0.16
Tmem56Q8CGF5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem56Q8CGF5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tmem56Q8CGF5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Tmem56Q8CGF5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms