Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC23.21■■□□□ 1.31
Smc4Q8CG47 Gm27011-201ENSMUST00000182352 972 ntBASIC23.21■■□□□ 1.31
Smc4Q8CG47 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.21■■□□□ 1.31
Smc4Q8CG47 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc4Q8CG47 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc4Q8CG47 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Smc4Q8CG47 Gm43859-201ENSMUST00000200075 1412 ntBASIC23.21■■□□□ 1.31
Smc4Q8CG47 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc4Q8CG47 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Smc4Q8CG47 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc4Q8CG47 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Smc4Q8CG47 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc4Q8CG47 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.31
Smc4Q8CG47 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc4Q8CG47 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Smc4Q8CG47 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc4Q8CG47 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc4Q8CG47 Gm37563-201ENSMUST00000192580 1513 ntBASIC23.2■■□□□ 1.3
Smc4Q8CG47 Gm13509-201ENSMUST00000119733 1308 ntBASIC23.2■■□□□ 1.3
Smc4Q8CG47 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Smc4Q8CG47 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Smc4Q8CG47 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Smc4Q8CG47 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
Smc4Q8CG47 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.2■■□□□ 1.3
Smc4Q8CG47 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc4Q8CG47 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc4Q8CG47 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc4Q8CG47 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc4Q8CG47 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Smc4Q8CG47 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc4Q8CG47 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc4Q8CG47 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc4Q8CG47 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Smc4Q8CG47 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC23.18■■□□□ 1.3
Smc4Q8CG47 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Smc4Q8CG47 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Smc4Q8CG47 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Smc4Q8CG47 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc4Q8CG47 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
Smc4Q8CG47 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc4Q8CG47 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc4Q8CG47 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC23.17■■□□□ 1.3
Smc4Q8CG47 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc4Q8CG47 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc4Q8CG47 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC23.17■■□□□ 1.3
Smc4Q8CG47 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc4Q8CG47 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.17■■□□□ 1.3
Smc4Q8CG47 Rab3c-203ENSMUST00000224180 967 ntBASIC23.17■■□□□ 1.3
Smc4Q8CG47 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.17■■□□□ 1.3
Smc4Q8CG47 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc4Q8CG47 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC23.17■■□□□ 1.3
Smc4Q8CG47 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Smc4Q8CG47 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc4Q8CG47 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC23.16■■□□□ 1.3
Smc4Q8CG47 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc4Q8CG47 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc4Q8CG47 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc4Q8CG47 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Smc4Q8CG47 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Smc4Q8CG47 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc4Q8CG47 Gm26524-201ENSMUST00000192339 390 ntBASIC23.16■■□□□ 1.3
Smc4Q8CG47 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Smc4Q8CG47 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc4Q8CG47 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc4Q8CG47 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.16■■□□□ 1.3
Smc4Q8CG47 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc4Q8CG47 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Golph3-202ENSMUST00000226517 2359 ntBASIC23.15■■□□□ 1.3
Smc4Q8CG47 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.15■■□□□ 1.3
Smc4Q8CG47 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc4Q8CG47 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
Smc4Q8CG47 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Smc4Q8CG47 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC23.14■■□□□ 1.3
Smc4Q8CG47 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Smc4Q8CG47 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Smc4Q8CG47 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms