Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 Gm29257-201ENSMUST00000186115 639 ntBASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 Grk6-206ENSMUST00000224995 2971 ntBASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vcpip1Q8CDG3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Gm11421-201ENSMUST00000122124 294 ntBASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vcpip1Q8CDG3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Gm6139-201ENSMUST00000079261 882 ntBASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vcpip1Q8CDG3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vcpip1Q8CDG3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcpip1Q8CDG3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcpip1Q8CDG3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcpip1Q8CDG3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vcpip1Q8CDG3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcpip1Q8CDG3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcpip1Q8CDG3 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.17■□□□□ 0.82
Vcpip1Q8CDG3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vcpip1Q8CDG3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.17■□□□□ 0.82
Vcpip1Q8CDG3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Vcpip1Q8CDG3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcpip1Q8CDG3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcpip1Q8CDG3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vcpip1Q8CDG3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcpip1Q8CDG3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcpip1Q8CDG3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcpip1Q8CDG3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vcpip1Q8CDG3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vcpip1Q8CDG3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Vcpip1Q8CDG3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vcpip1Q8CDG3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Vcpip1Q8CDG3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.14■□□□□ 0.81
Vcpip1Q8CDG3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
Vcpip1Q8CDG3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vcpip1Q8CDG3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vcpip1Q8CDG3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vcpip1Q8CDG3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vcpip1Q8CDG3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vcpip1Q8CDG3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms