Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap54Q8C6S9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Gm18666-201ENSMUST00000190039 958 ntBASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap54Q8C6S9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cfap54Q8C6S9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap54Q8C6S9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap54Q8C6S9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap54Q8C6S9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Cfap54Q8C6S9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap54Q8C6S9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap54Q8C6S9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.23■□□□□ 0.51
Cfap54Q8C6S9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cfap54Q8C6S9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cfap54Q8C6S9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap54Q8C6S9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cfap54Q8C6S9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cfap54Q8C6S9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.21■□□□□ 0.5
Cfap54Q8C6S9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.21■□□□□ 0.5
Cfap54Q8C6S9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cfap54Q8C6S9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cfap54Q8C6S9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cfap54Q8C6S9 Gm6659-201ENSMUST00000174752 547 ntBASIC18.2■□□□□ 0.5
Cfap54Q8C6S9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap54Q8C6S9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cfap54Q8C6S9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap54Q8C6S9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap54Q8C6S9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms