Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps9d1Q8C190 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps9d1Q8C190 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps9d1Q8C190 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps9d1Q8C190 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps9d1Q8C190 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps9d1Q8C190 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vps9d1Q8C190 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Vps9d1Q8C190 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps9d1Q8C190 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps9d1Q8C190 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps9d1Q8C190 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vps9d1Q8C190 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps9d1Q8C190 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps9d1Q8C190 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps9d1Q8C190 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps9d1Q8C190 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps9d1Q8C190 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.53■□□□□ 0.4
Vps9d1Q8C190 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vps9d1Q8C190 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps9d1Q8C190 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps9d1Q8C190 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps9d1Q8C190 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps9d1Q8C190 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps9d1Q8C190 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Vps9d1Q8C190 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.52■□□□□ 0.4
Vps9d1Q8C190 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps9d1Q8C190 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps9d1Q8C190 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps9d1Q8C190 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps9d1Q8C190 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps9d1Q8C190 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps9d1Q8C190 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps9d1Q8C190 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps9d1Q8C190 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps9d1Q8C190 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps9d1Q8C190 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps9d1Q8C190 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Vps9d1Q8C190 Gm43137-201ENSMUST00000198052 594 ntBASIC17.51■□□□□ 0.39
Vps9d1Q8C190 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.51■□□□□ 0.39
Vps9d1Q8C190 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps9d1Q8C190 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps9d1Q8C190 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps9d1Q8C190 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps9d1Q8C190 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms