Protein–RNA interactions for Protein: Q8BVU0

Lrch3, Leucine-rich repeat and calponin homology domain-containing protein 3, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch3Q8BVU0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrch3Q8BVU0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrch3Q8BVU0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrch3Q8BVU0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lrch3Q8BVU0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrch3Q8BVU0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lrch3Q8BVU0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrch3Q8BVU0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrch3Q8BVU0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrch3Q8BVU0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Lrch3Q8BVU0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrch3Q8BVU0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrch3Q8BVU0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrch3Q8BVU0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrch3Q8BVU0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Lrch3Q8BVU0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Lrch3Q8BVU0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrch3Q8BVU0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrch3Q8BVU0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Lrch3Q8BVU0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrch3Q8BVU0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrch3Q8BVU0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrch3Q8BVU0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrch3Q8BVU0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrch3Q8BVU0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrch3Q8BVU0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrch3Q8BVU0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrch3Q8BVU0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lrch3Q8BVU0 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.54■□□□□ 0.88
Lrch3Q8BVU0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrch3Q8BVU0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrch3Q8BVU0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lrch3Q8BVU0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.52■□□□□ 0.88
Lrch3Q8BVU0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lrch3Q8BVU0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lrch3Q8BVU0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch3Q8BVU0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch3Q8BVU0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Lrch3Q8BVU0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Lrch3Q8BVU0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch3Q8BVU0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch3Q8BVU0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch3Q8BVU0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch3Q8BVU0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrch3Q8BVU0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch3Q8BVU0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch3Q8BVU0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch3Q8BVU0 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.5■□□□□ 0.87
Lrch3Q8BVU0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch3Q8BVU0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch3Q8BVU0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.5■□□□□ 0.87
Lrch3Q8BVU0 Gm18032-201ENSMUST00000222541 538 ntBASIC20.5■□□□□ 0.87
Lrch3Q8BVU0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch3Q8BVU0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch3Q8BVU0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrch3Q8BVU0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch3Q8BVU0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch3Q8BVU0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch3Q8BVU0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
Lrch3Q8BVU0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch3Q8BVU0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Lrch3Q8BVU0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lrch3Q8BVU0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch3Q8BVU0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch3Q8BVU0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrch3Q8BVU0 Gm43183-201ENSMUST00000200632 547 ntBASIC20.48■□□□□ 0.87
Lrch3Q8BVU0 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.48■□□□□ 0.87
Lrch3Q8BVU0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrch3Q8BVU0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrch3Q8BVU0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch3Q8BVU0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch3Q8BVU0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch3Q8BVU0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.47■□□□□ 0.87
Lrch3Q8BVU0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch3Q8BVU0 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.47■□□□□ 0.87
Lrch3Q8BVU0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch3Q8BVU0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch3Q8BVU0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch3Q8BVU0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrch3Q8BVU0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch3Q8BVU0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.46■□□□□ 0.87
Lrch3Q8BVU0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch3Q8BVU0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch3Q8BVU0 Gm3375-201ENSMUST00000203929 796 ntBASIC20.46■□□□□ 0.87
Lrch3Q8BVU0 Gm18959-201ENSMUST00000208954 655 ntBASIC20.46■□□□□ 0.87
Lrch3Q8BVU0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch3Q8BVU0 Odf3b-204ENSMUST00000227834 930 ntBASIC20.46■□□□□ 0.87
Lrch3Q8BVU0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrch3Q8BVU0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms