Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Golph3-202ENSMUST00000226517 2359 ntBASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap1Q8BTW8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdk5rap1Q8BTW8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Cdk5rap1Q8BTW8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdk5rap1Q8BTW8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdk5rap1Q8BTW8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdk5rap1Q8BTW8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdk5rap1Q8BTW8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cdk5rap1Q8BTW8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap1Q8BTW8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.83■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.83■□□□□ 0.44
Cdk5rap1Q8BTW8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap1Q8BTW8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap1Q8BTW8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap1Q8BTW8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap1Q8BTW8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cdk5rap1Q8BTW8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap1Q8BTW8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap1Q8BTW8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm26524-201ENSMUST00000192339 390 ntBASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap1Q8BTW8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap1Q8BTW8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdk5rap1Q8BTW8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.79■□□□□ 0.44
Cdk5rap1Q8BTW8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms