Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Scfd1Q8BRF7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.62■■□□□ 1.05
Scfd1Q8BRF7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scfd1Q8BRF7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Scfd1Q8BRF7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scfd1Q8BRF7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scfd1Q8BRF7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Gm8520-201ENSMUST00000186517 868 ntBASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scfd1Q8BRF7 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scfd1Q8BRF7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 Gm22240-201ENSMUST00000175225 82 ntBASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Scfd1Q8BRF7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.58■■□□□ 1.05
Scfd1Q8BRF7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scfd1Q8BRF7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scfd1Q8BRF7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scfd1Q8BRF7 Trmt13-210ENSMUST00000198454 880 ntBASIC21.58■■□□□ 1.05
Scfd1Q8BRF7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scfd1Q8BRF7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Scfd1Q8BRF7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
Scfd1Q8BRF7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scfd1Q8BRF7 Golph3-202ENSMUST00000226517 2359 ntBASIC21.58■■□□□ 1.04
Scfd1Q8BRF7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Scfd1Q8BRF7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scfd1Q8BRF7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scfd1Q8BRF7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scfd1Q8BRF7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.57■■□□□ 1.04
Scfd1Q8BRF7 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.57■■□□□ 1.04
Scfd1Q8BRF7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scfd1Q8BRF7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Scfd1Q8BRF7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scfd1Q8BRF7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.57■■□□□ 1.04
Scfd1Q8BRF7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Gm13168-201ENSMUST00000121771 632 ntBASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scfd1Q8BRF7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scfd1Q8BRF7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms