Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpsf4Q8BQZ5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Gm10493-201ENSMUST00000097270 612 ntBASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpsf4Q8BQZ5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cpsf4Q8BQZ5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpsf4Q8BQZ5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpsf4Q8BQZ5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpsf4Q8BQZ5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.17■□□□□ 0.5
Cpsf4Q8BQZ5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms