Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prpf18Q8BM39 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.86■□□□□ 0.45
Prpf18Q8BM39 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prpf18Q8BM39 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prpf18Q8BM39 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf18Q8BM39 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf18Q8BM39 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.83■□□□□ 0.45
Prpf18Q8BM39 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf18Q8BM39 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.83■□□□□ 0.45
Prpf18Q8BM39 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.83■□□□□ 0.44
Prpf18Q8BM39 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.83■□□□□ 0.44
Prpf18Q8BM39 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf18Q8BM39 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf18Q8BM39 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf18Q8BM39 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf18Q8BM39 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf18Q8BM39 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf18Q8BM39 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf18Q8BM39 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms